DNA Binding Motif

						

			
Accessions: HOXB2_TBX21_2_3 (HumanTF2 1.0)

			
Names: HOXB2_TBX21
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 13
Consensus: trAtkAgGTGykA
Weblogo: 
PSSM: P0      A      C      G      T
01    406    304    274   1356      t
02   1356    167    985    383      r
03   1356      7    184     14      A
04    258    605    401   1356      t
05    197    101    841    515      k
06   1052     17    304     85      A
07    621    295   1356    299      g
08     39    245   1356     54      G
09      6    135     36   1356      T
10     34      1   1356      9      G
11    196    582     82    774      y
12    332    158    550    806      k
13   1356     43    188     65      A
Type: Heterodimer
Binding TFs: HOXB2_TF1 (Homeobox domain)
TBX21_TF2 (T-box)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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