DNA Binding Motif

Accessions: GCM1_methyl_1 (HT-SELEX2 May2017)
Names: GCM1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 9
Consensus: ATrrkGGyr
Weblogo:
PSSM: P0 A C G T
01 6023 842 1535 0 A
02 0 0 0 7558 T
03 2456 0 5102 0 r
04 2242 1673 2267 1375 r
05 621 86 7558 3531 k
06 0 0 7558 0 G
07 0 0 7558 0 G
08 885 3977 0 7558 y
09 3088 1005 2660 804 r
Binding TFs: GCM1 (GCM motif protein)
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

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