DNA Binding Motif

						

			
Accessions: ZNF296_2 (HT-SELEX2 May2017), UN0175.1 (JASPAR 2024)

			
Names: ZNF296
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1, JASPAR 2024 2
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 11
Consensus: brsTGGwCAbt
Weblogo: 
PSSM: P0      A      C      G      T
01    133    313    328    377      b
02   1151    267    704    237      r
03    163    368    783     63      s
04     45     96      0   1151      T
05      0     10   1151      0      G
06      0      3   1151     12      G
07    764     79      0    387      w
08     20   1151     27     19      C
09   1151     37    144     36      A
10    113    580    571    479      b
11    106    226    212    607      t
Type: Heterodimer
Binding TFs: ZNF296 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Q8WUU4 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q8WUU4
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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