DNA Binding Motif
| Accessions: | UN0359.1 (JASPAR 2024) |
| Names: | BHLH28 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 15 |
| Consensus: | wwwwrTCCGTACaaw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 806 581 525 836 w 02 740 657 481 870 w 03 716 514 610 908 w 04 688 548 559 953 w 05 734 287 1141 586 r 06 394 51 291 2012 T 07 117 2536 12 83 C 08 22 2660 16 50 C 09 16 5 2716 11 G 10 10 4 9 2725 T 11 2714 12 12 10 A 12 8 2699 19 22 C 13 1731 261 509 247 a 14 1043 455 581 669 a 15 823 489 436 1000 w |
| Type: | Heterodimer |
| Binding TFs: | Q9LUK7 (Helix-loop-helix DNA-binding domain, bHLH-MYC and R2R3-MYB transcription factors N-terminal) Q9LUK7 |
| Binding Sites: | UN0359.1.1 UN0359.1.10 / UN0359.1.7 UN0359.1.11 / UN0359.1.8 UN0359.1.12 / UN0359.1.9 UN0359.1.13 UN0359.1.10 / UN0359.1.14 UN0359.1.11 / UN0359.1.15 UN0359.1.12 / UN0359.1.16 UN0359.1.13 / UN0359.1.17 UN0359.1.18 UN0359.1.14 / UN0359.1.19 UN0359.1.2 UN0359.1.20 UN0359.1.3 UN0359.1.3 / UN0359.1.4 UN0359.1.5 UN0359.1.4 / UN0359.1.6 UN0359.1.7 UN0359.1.5 / UN0359.1.8 UN0359.1.6 / UN0359.1.9 UN0359.1.15 UN0359.1.16 UN0359.1.17 UN0359.1.18 UN0359.1.19 UN0359.1.20 |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.