DNA Binding Motif

						

			
Accessions: ONECUT1_4 (HT-SELEX2 May2017)

			
Names: ONECUT1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: kTATCGATCGss
Weblogo: 
PSSM: P0      A      C      G      T
01   2189   1755   5746   3473      k
02   1624   2456    692  13163      T
03  13163      3      0      0      A
04      0      6      0  13163      T
05      0  13163      0      0      C
06     15      0  13163      0      G
07  13163      0      0      0      A
08      0      0      0  13163      T
09      0  13163      0   2954      C
10      0   1015  13163      0      G
11   1996   3749   4252   3166      s
12   3154   3374   3794   2841      s
Binding TFs: ONECUT1 (Homeobox domain, CUT domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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