DNA Binding Motif

Accessions: MA1987.1 (JASPAR 2024)
Names: ZNF701
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-exo
Length: 21
Consensus: GAGmAsyaarGGGGGrArdkg
Weblogo:
PSSM: P0 A C G T
01 27 14.881 955 2.98 G
02 943 2.98 51 2.98 A
03 27 27 943 2.98 G
04 301 610 86 2.98 m
05 836.31 14.881 134 14.881 A
06 51 515 253 182 s
07 86 503 146 265 y
08 443 158 193 205 a
09 443 122 217 217 a
10 432 98 384 86 r
11 74 2.98 896 27 G
12 14.881 2.98 979 2.98 G
13 14.881 51 920 14.881 G
14 182 2.98 753 62.5 G
15 110 2.98 872 14.881 G
16 432 86 455 27 r
17 693 51 146 110 A
18 348 158 277 217 r
19 277 146 312.5 265 d
20 241 98 372 288.69 k
21 205 193 396 205 g
Type: Heterodimer
Binding TFs: Q9NV72 (Zinc finger, C2H2 type, KRAB box, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q9NV72
Publications: ENCODE Project Consortium. An integrated encyclopedia of DNA elements in the human genome. Nature 489:57-74 (2012). [Pubmed]

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.