DNA Binding Motif

Accessions: Rhox11_DBD (HumanTF 1.0)
Names: Rhox11
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 4
Length: 9
Consensus: ygcTGTwaw
Weblogo:
PSSM: P0 A C G T
01 238 521 125 501 y
02 456 192 1385 135 g
03 396 1385 440 73 c
04 11 0 0 1385 T
05 115 0 1385 53 G
06 0 0 0 1385 T
07 654 0 0 730 w
08 1385 536 305 566 a
09 614 338 43 390 w
Binding TFs: Rhox11_DBD (Homeobox domain)
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

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