DNA Binding Motif

						

			
Accessions: MA1593.1 (JASPAR 2024)

			
Names: ZNF317
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 12
Consensus: wrACAGCAGAyw
Weblogo: 
PSSM: P0      A      C      G      T
01   2959   1201   1985   5318      w
02   4274   2141   3670   1378      r
03   9381    357    480   1245      A
04    281  10821    183    178      C
05  10344     85    317    717      A
06    691    192  10374    206      G
07    395  10608    223    237      C
08   9323    250    289   1601      A
09    284    186  10730    263      G
10  10825    208    206    224      A
11   2072   4399   1334   3658      y
12   3852   1709   1481   4421      w
Type: Heterodimer
Binding TFs: Q96PQ6 (Zinc finger, C2H2 type, KRAB box, C2H2 type zinc-finger (2 copies), Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q96PQ6
Binding Sites: MA1593.1.1
MA1593.1.10 / MA1593.1.9
MA1593.1.10 / MA1593.1.11
MA1593.1.11 / MA1593.1.12
MA1593.1.12 / MA1593.1.13
MA1593.1.13 / MA1593.1.14
MA1593.1.14 / MA1593.1.15
MA1593.1.15 / MA1593.1.16
MA1593.1.16 / MA1593.1.17
MA1593.1.18
MA1593.1.17 / MA1593.1.19
MA1593.1.1 / MA1593.1.2
MA1593.1.18 / MA1593.1.20
MA1593.1.2 / MA1593.1.3
MA1593.1.3 / MA1593.1.4
MA1593.1.4 / MA1593.1.5
MA1593.1.5 / MA1593.1.6
MA1593.1.6 / MA1593.1.7
MA1593.1.7 / MA1593.1.8
MA1593.1.8 / MA1593.1.9
MA1593.1.19
MA1593.1.20
			
Publications: Imbeault M, Helleboid PY, Trono D. KRAB zinc-finger proteins contribute to the evolution of gene regulatory networks. Nature 543:550-554 (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.