DNA Binding Motif
| Accessions: | MA1508.1 (JASPAR 2024) |
| Names: | IKZF1 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 12 |
| Consensus: | rrAACAGGAAry |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 3295 2055 3873 1695 r 02 4187 2292 2868 1571 r 03 8122 1158 1007 631 A 04 9137 473 956 352 A 05 673 8678 1272 295 C 06 10194 212 252 260 A 07 125 106 10569 118 G 08 418 178 10185 137 G 09 10323 247 297 51 A 10 10254 114 261 289 A 11 3300 1675 4919 1024 r 12 2221 2991 2317 3389 y |
| Type: | Heterodimer |
| Binding TFs: | Q13422 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) Q13422 |
| Binding Sites: | MA1508.1.1 MA1508.1.10 / MA1508.1.6 MA1508.1.11 / MA1508.1.12 / MA1508.1.7 / MA1508.1.8 MA1508.1.13 / MA1508.1.9 MA1508.1.14 MA1508.1.10 / MA1508.1.15 MA1508.1.16 MA1508.1.17 MA1508.1.18 MA1508.1.19 MA1508.1.2 MA1508.1.11 / MA1508.1.20 MA1508.1.3 MA1508.1.4 MA1508.1.2 / MA1508.1.5 MA1508.1.3 / MA1508.1.6 MA1508.1.4 / MA1508.1.7 MA1508.1.8 MA1508.1.5 / MA1508.1.9 MA1508.1.12 MA1508.1.13 MA1508.1.14 MA1508.1.15 MA1508.1.16 MA1508.1.17 MA1508.1.18 MA1508.1.19 MA1508.1.20 |
| Publications: | Hu Y, Zhang Z, Kashiwagi M, Yoshida T, Joshi I, Jena N, Somasundaram R, Emmanuel AO, Sigvardsson M, Fitamant J, El-Bardeesy N, Gounari F, Van Etten RA, Georgopoulos K. Superenhancer reprogramming drives a B-cell-epithelial transition and high-risk leukemia. Genes Dev 30:1971-90 (2016). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.