DNA Binding Motif
| Accessions: | MA1678.2 (JASPAR 2024) |
| Names: | NTL8 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 13 |
| Consensus: | wtGAAGAAACctw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 324 197 197 264 w 02 245 165 175 397 t 03 64 171 669 78 G 04 958 5 10 9 A 05 912 12 42 16 A 06 8 6 956 12 G 07 795 79 35 73 A 08 957 4 3 18 A 09 933 10 16 23 A 10 45 850 40 47 C 11 220 468 96 198 c 12 245 189 142 406 t 13 324 201 154 303 w |
| Type: | Heterodimer |
| Binding TFs: | Q9XIN7 (No apical meristem (NAM) protein) Q9XIN7 |
| Binding Sites: | MA1678.2.8 MA1678.2.2 MA1678.2.16 MA1678.2.1 MA1678.2.10 MA1678.2.11 MA1678.2.12 MA1678.2.13 MA1678.2.14 MA1678.2.15 MA1678.2.17 MA1678.2.18 MA1678.2.19 MA1678.2.20 MA1678.2.3 MA1678.2.4 MA1678.2.5 MA1678.2.6 MA1678.2.7 MA1678.2.9 |
| Publications: | Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.