DNA Binding Motif
| Accessions: | MA1391.2 (JASPAR 2024) |
| Names: | MYB33 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 13 |
| Consensus: | wwaTAACCGTaww |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 192 147 70 213 w 02 217 126 75 204 w 03 341 75 85 121 a 04 20 11 2 589 T 05 614 3 3 2 A 06 613 0 7 2 A 07 0 615 0 7 C 08 12 569 6 35 C 09 31 1 586 4 G 10 148 35 15 424 T 11 370 87 16 149 a 12 268 51 61 242 w 13 199 135 107 181 w |
| Type: | Heterodimer |
| Binding TFs: | Q8W1W6 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) Q8W1W6 |
| Binding Sites: | MA1391.2.1 MA1391.2.10 / MA1391.2.6 MA1391.2.11 / MA1391.2.7 MA1391.2.12 MA1391.2.13 / MA1391.2.8 MA1391.2.14 MA1391.2.15 MA1391.2.16 MA1391.2.17 MA1391.2.18 MA1391.2.19 / MA1391.2.9 MA1391.2.2 MA1391.2.20 MA1391.2.3 MA1391.2.4 MA1391.2.5 MA1391.2.3 / MA1391.2.6 MA1391.2.7 MA1391.2.5 / MA1391.2.8 MA1391.2.9 MA1391.2.10 MA1391.2.11 MA1391.2.12 MA1391.2.13 MA1391.2.14 MA1391.2.15 MA1391.2.16 MA1391.2.17 MA1391.2.18 MA1391.2.19 MA1391.2.20 MA1391.2.4 |
| Publications: | Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.