DNA Binding Motif

						

			
Accessions: M0643 (AthalianaCistrome v4_May2016)

			
Names: NST1.DAP, T10279;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 17
Consensus: TwrCkTraawwwcAMGc
Weblogo: 
PSSM: P0      A      C      G      T
01    117      3      0    476      T
02    268      3     93    232      w
03    283     21    254     38      r
04     54    542      0      0      C
05      0      0    378    218      k
06      0      0      2    594      T
07    291     50    252      3      r
08    271    121     88    116      a
09    315     57    130     94      a
10    240     80    105    171      w
11    164    119     43    270      w
12    220     54     89    233      w
13     47    301    148    100      c
14    596      0      0      0      A
15    421    175      0      0      M
16      3      0    571     22      G
17     62    378     56    100      c
Binding TFs: T10279 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.