DNA Binding Motif

						

			
Accessions: NFAT5_DBD (HumanTF 1.0)

			
Names: NFAT5
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 14
Consensus: rTGGAAAAtTACwr
Weblogo: 
PSSM: P0      A      C      G      T
01   6103    362   5419     88      r
02     40    850     11  11522      T
03      2      1  11522      4      G
04      1      1  11522      6      G
05  11522      0      3      0      A
06  11522      0      1      0      A
07  11522      0     38    136      A
08  11522    201   1458   3541      A
09   1570   1014   2283   6655      t
10    430    852      2  11522      T
11   8996   2526      5     51      A
12      4  11522      0      4      C
13   5251   2289    528   3454      w
14   3425   1716   4915   1465      r
Binding TFs: NFAT5_DBD (Rel homology domain (RHD))
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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