DNA Binding Motif

						

			
Accessions: 1a1l_A (3D-footprint 20231221)

			
Names: PROTEIN (ZIF268 ZINC FINGER PEPTIDE)
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: ZIF268 ZINC FINGER-DNA COMPLEX (GCAC SITE)
Length: 8
Consensus: GCCCaCGC
Weblogo: 
PSSM: P0      A      C      G      T
01     19      0     76      1      G
02      0     96      0      0      C
03      0     96      0      0      C
04      0     96      0      0      C
05     38     20     19     19      a
06      0     96      0      0      C
07      0      0     96      0      G
08      0     96      0      0      C
Binding TFs: 1a1l_A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Binding Sites: 1a1l_B
1a1l_C
			
Publications: Elrod-Erickson M, Benson T.E, Pabo C.O. High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition. Structure (London, England : 1993) 6:451-64 (1998). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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