DNA Binding Motif

						

			
Accessions: ZSCAN23_methyl_1 (HT-SELEX2 May2017)

			
Names: ZSCAN23
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 19
Consensus: ryCATGTGCTAATTACraa
Weblogo: 
PSSM: P0      A      C      G      T
01   2664   1777   2434   1707      r
02    730   2855    377   5090      y
03    457   7793     92   1059      C
04   8580     38     58      5      A
05      7      0    257   8512      T
06    390     63   8401      2      G
07      7    465      1   8373      T
08     11      1   8572      1      G
09    226   8524      0      1      C
10      0      5      0   8580      T
11   8550    191      1      7      A
12   8542      0     38      1      A
13      2    445      0   8230      T
14     62    868     14   8438      T
15   8568     81    722      0      A
16      0   8577      0      6      C
17   5727    281   4438    224      r
18   5371   2218   1025   1640      a
19   4186   1259   1601   1535      a
Binding TFs: ZSCAN23 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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