DNA Binding Motif
| Accessions: | MA2006.2 (JASPAR 2024) |
| Names: | NAC020 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 21 |
| Consensus: | ggTTgCkTGTgwcaCAAGtaA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 149 77 550 146 g 02 161 84 541 136 g 03 45 7 2 868 T 04 147 11 78 686 T 05 198 62 463 199 g 06 27 885 1 9 C 07 2 2 448 470 k 08 1 1 1 919 T 09 70 66 769 17 G 10 105 94 49 674 T 11 228 112 384 198 g 12 255 210 201 256 w 13 208 379 147 188 c 14 578 61 145 138 a 15 35 734 100 53 C 16 921 0 1 0 A 17 849 69 3 1 A 18 2 1 910 9 G 19 200 133 89 500 t 20 585 105 14 218 a 21 767 6 13 136 A |
| Type: | Heterodimer |
| Binding TFs: | Q67Z40 (No apical meristem (NAM) protein) Q67Z40 |
| Binding Sites: | MA2006.2.1 MA2006.2.10 MA2006.2.11 MA2006.2.12 MA2006.2.13 MA2006.2.14 MA2006.2.15 MA2006.2.16 MA2006.2.17 MA2006.2.18 MA2006.2.19 MA2006.2.2 MA2006.2.20 MA2006.2.3 MA2006.2.4 MA2006.2.5 MA2006.2.6 MA2006.2.7 MA2006.2.8 MA2006.2.9 |
| Publications: | Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.