DNA Binding Motif

						

			
Accessions: M0308 (AthalianaCistrome v4_May2016)

			
Names: At5g04390.DAP, T22974;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 11
Consensus: dAGTGwwrkwr
Weblogo: 
PSSM: P0      A      C      G      T
01    152    108    166    173      d
02    599      0      0      0      A
03      0     22    577      0      G
04      0      0      0    599      T
05      9      0    590      0      G
06    335      0    102    162      w
07    305     53     79    162      w
08    176     72    264     87      r
09    123     71    176    229      k
10    196     35    128    240      w
11    202     50    242    105      r
Binding TFs: T22974 (C2H2-type zinc finger, C2H2-type zinc finger)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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