DNA Binding Motif
| Accessions: | MA0938.1 (JASPAR 2024) |
| Names: | NAC058 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | PBM |
| Length: | 8 |
| Consensus: | rcAMGCaA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 370 124 344 162 r 02 95 674 55 177 c 03 913 34 22 31 A 04 257 694 26 23 M 05 26 38 908 28 G 06 116 693 72 120 C 07 628 245 20 107 a 08 770 88 26 116 A |
| Type: | Heterodimer |
| Binding TFs: | Q9LS50 (No apical meristem (NAM) protein) Q9LS50 |
| Binding Sites: | MA0938.1.1 MA0938.1.10 MA0938.1.11 MA0938.1.12 MA0938.1.13 MA0938.1.14 MA0938.1.15 MA0938.1.16 MA0938.1.17 MA0938.1.18 MA0938.1.19 MA0938.1.2 MA0938.1.20 MA0938.1.3 MA0938.1.4 MA0938.1.5 MA0938.1.6 MA0938.1.7 MA0938.1.8 MA0938.1.9 |
| Publications: | Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). [Pubmed] |
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