DNA Binding Motif

						

			
Accessions: NFIC_methyl_1 (HT-SELEX2 May2017)

			
Names: NFIC
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 17
Consensus: gtTGGCrygrtGCCArs
Weblogo: 
PSSM: P0      A      C      G      T
01   2367   2693   3353   2648      g
02   1861   3027    704  11062      t
03      0      0    689  11062      T
04      0      1  11062      1      G
05      0      1  11062      0      G
06   2397  11062      0      0      C
07   3423   1410   3653   2576      r
08   2322   3368   2087   3284      y
09   2610   2700   3103   2649      g
10   2863   1898   3720   2581      r
11   1851   2792    836  11062      t
12      0      0  11062   1381      G
13      0  11062      3      0      C
14      0  11062      0      4      C
15  11062    634      0      0      A
16   6219    627   4843   1317      r
17   2382   3004   3000   2676      s
Binding TFs: NFIC (CTF/NF-I family transcription modulation region, MH1 domain, Nuclear factor I protein pre-N-terminus)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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