DNA Binding Motif
| Accessions: | MA1005.3 (JASPAR 2024) |
| Names: | ERF082 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 9 |
| Consensus: | cCGCCGCCr |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 162 1145 257 319 c 02 113 1713 16 41 C 03 186 8 1658 31 G 04 0 1878 3 2 C 05 30 1844 1 8 C 06 149 2 1697 35 G 07 2 1852 7 22 C 08 12 1852 1 18 C 09 658 48 925 252 r |
| Type: | Heterodimer |
| Binding TFs: | O80339 (AP2 domain) O80339 |
| Binding Sites: | MA1005.3.1 / MA1005.3.4 MA1005.3.17 MA1005.3.10 MA1005.3.11 / MA1005.3.12 MA1005.3.13 / MA1005.3.14 / MA1005.3.19 / MA1005.3.20 / MA1005.3.5 / MA1005.3.6 / MA1005.3.7 / MA1005.3.8 MA1005.3.15 MA1005.3.16 MA1005.3.18 MA1005.3.2 MA1005.3.3 MA1005.3.9 |
| Publications: | Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). [Pubmed] |
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