DNA Binding Motif

						

			
Accessions: NR3C2_methyl_1 (HT-SELEX2 May2017)

			
Names: NR3C2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 15
Consensus: rGtACrykryGTaCy
Weblogo: 
PSSM: P0      A      C      G      T
01   4631   2696   5693   2228      r
02   1547    475  15248   1824      G
03   3406   2705   3329   5808      t
04  15248     53    430    345      A
05      0  15248     79    235      C
06   8288    165   6960    837      r
07   2007   4738   2759   5744      y
08   3685   3728   3984   3850      k
09   6012   2644   4687   1905      r
10    804   7092    322   8156      y
11    198     26  15248      0      G
12    244    486      0  15248      T
13   5833   3418   2637   3360      a
14   1838  15248    571   1459      C
15   2241   5578   2814   4615      y
Binding TFs: NR3C2 (Zinc finger, C4 type (two domains))
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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