DNA Binding Motif

						

			
Accessions: PRRX1_full_1 (HumanTF 1.0)

			
Names: PRRX1
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 2
Length: 8
Consensus: cyAATTAr
Weblogo: 
PSSM: P0      A      C      G      T
01   1414   4493   1746   2523      c
02    684   5111    326   5066      y
03  10177    764    640    532      A
04  10177    358    117    307      A
05     57     28      0  10177      T
06    547   1210    438  10177      T
07  10177    709     57    979      A
08   3287   2230   2968   1693      r
Binding TFs: PRRX1_full (Homeobox domain, OAR domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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