DNA Binding Motif

						

			
Accessions: RUNX1_HUMAN.H10MO.A|M01490 (HOCOMOCO 10)

			
Names: RUNX1
Organisms: Homo sapiens
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: Runt-related factors{6.4.1}; Runx1 (PEBP2alphaB, CBF-alpha2, AML-1){6.4.1.0.2}
Length: 11
Consensus: byTGTGGTTwk
Weblogo: 
PSSM: P0      A      C      G      T
01     65    147    137    151      b
02     47    241     12    200      y
03      8      7      4    481      T
04      0      1    497      2      G
05      7    123      6    364      T
06      2      0    498      0      G
07      0      0    500      0      G
08      1     32     21    446      T
09      9    122     19    350      T
10    173     21     46    260      w
11     73    121    181    125      k
Binding TFs: RUNX1_HUMAN (Runt domain, Runx inhibition domain)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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