DNA Binding Motif

						

			
Accessions: 1n6j_AB (3D-footprint 20231221)

			
Names: Myocyte-specific enhancer factor 2B
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structural basis of sequence-specific recruitment of histone deacetylases by Myocyte Enhancer Factor-2
Length: 9
Consensus: TawwwrtAg
Weblogo: 
PSSM: P0      A      C      G      T
01      9      9      2     76      T
02     57     12     15     12      a
03     27     22     19     28      w
04     27     21     21     27      w
05     25     22     23     26      w
06     33     22     24     17      r
07     10     15      9     62      t
08     67      7     12     10      A
09     14     14     54     14      g
Type: Heterodimer
Binding TFs: 1n6j_A (SRF-type transcription factor (DNA-binding and dimerisation domain))
1n6j_B (SRF-type transcription factor (DNA-binding and dimerisation domain))
Binding Sites: 1n6j_C
1n6j_D
			
Publications: Han A, Pan F, Stroud J.C, Youn H.D, Liu J.O, Chen L. Sequence-specific recruitment of transcriptional co-repressor Cabin1 by myocyte enhancer factor-2. Nature 422:730-4 (2003). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.