DNA Binding Motif
| Accessions: | 5ke9_A (3D-footprint 20231221) |
| Names: | Krueppel-like factor 4 |
| Organisms: | Mus musculus |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | mouse Klf4 E446P ZnF1-3 and TpG/CpA sequence DNA complex structure |
| Length: | 9 |
| Consensus: | RGGTGTGgy |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 27 0 69 0 R 02 0 0 96 0 G 03 0 0 96 0 G 04 0 0 0 96 T 05 0 0 96 0 G 06 0 0 0 96 T 07 0 0 96 0 G 08 17 10 52 17 g 09 8 43 19 26 y |
| Binding TFs: | 5ke9_A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) |
| Binding Sites: | 5ke9_B 5ke9_C |
| Publications: | Hashimoto H, Wang D, Steves AN, Jin P, Blumenthal RM, Zhang X, Cheng X. Distinctive Klf4 mutants determine preference for DNA methylation status. Nucleic Acids Res 44:10177-10185 (2016). [Pubmed] |
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