DNA Binding Motif

						

			
Accessions: LHX6_full_2 (HumanTF 1.0)

			
Names: LHX6
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 16
Consensus: TAATTAGyryTrATTR
Weblogo: 
PSSM: P0      A      C      G      T
01     15    469      5   2675      T
02   2564     68    408     22      A
03   2661      5      5      5      A
04      0      3     21   2986      T
05      0    151     29   2910      T
06   2692      4    216      0      A
07    264    452   3382    157      G
08    236   1755    343   1377      y
09    933    401   2213     84      r
10     57   1591    277   1461      y
11      1     40      6   2923      T
12   1571     19   1442     11      r
13   2760     23      3      0      A
14      0     54      5   2874      T
15     15    147    122   2766      T
16   2167     11    844      2      R
Binding TFs: LHX6_full (Homeobox domain, LIM domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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