DNA Binding Motif

						

			
Accessions: HOXC10_methyl_1 (HT-SELEX2 May2017)

			
Names: HOXC10
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: sRTCGTAAAay
Weblogo: 
PSSM: P0      A      C      G      T
01   1600   2637   4034   1404      s
02   2684    475   6992      0      R
03      0      1      0   9676      T
04      0   9676      0      0      C
05    804      0   9676      0      G
06      0      0      0   9676      T
07   9676      0      0   1648      A
08   9676      0      0      0      A
09   9676     44      0     19      A
10   9676   3957   2213   4222      a
11   1604   3712   1854   2506      y
Binding TFs: HOXC10 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.