DNA Binding Motif

						

			
Accessions: MA1961.1 (JASPAR 2024)

			
Names: PATZ1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 12
Consensus: ssGGGGmGGGGs
Weblogo: 
PSSM: P0      A      C      G      T
01    125 331.94    446     98      s
02    125    288    543     44      s
03     68    228    680     24      G
04    195     78    727   0.84      G
05   0.84   0.84    997   0.84      G
06   0.84   0.84    997   0.84      G
07    355 489.13   0.84    155      m
08   0.84   0.84    997   0.84      G
09   0.84     41    957   0.84      G
10   0.84     34    964   0.84      G
11     54   0.84 943.98   0.84      G
12     51 392.14    523     34      s
Type: Heterodimer
Binding TFs: Q9HBE1 (Zinc finger, C2H2 type, BTB/POZ domain, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Q9HBE1
			
Publications: Ow JR, Ma H, Jean A, Goh Z, Lee YH, Chong YM, Soong R, Fu XY, Yang H, Wu Q. Patz1 regulates embryonic stem cell identity. Stem Cells Dev 23:1062-73 (2014). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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