DNA Binding Motif
| Accessions: | MA1265.2 (JASPAR 2024) |
| Names: | ERF015 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 12 |
| Consensus: | dyCACCGACAmh |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 375 146 356 341 d 02 130 594 153 341 y 03 26 1145 18 29 C 04 1121 0 73 24 A 05 3 1209 2 4 C 06 6 1209 0 3 C 07 9 1 1205 3 G 08 897 141 24 156 A 09 11 1201 3 3 C 10 1001 30 132 55 A 11 438 361 181 238 m 12 384 330 147 357 h |
| Type: | Heterodimer |
| Binding TFs: | Q6NLD5 (AP2 domain) Q6NLD5 |
| Binding Sites: | MA1265.2.14 MA1265.2.1 MA1265.2.10 MA1265.2.11 MA1265.2.12 MA1265.2.13 MA1265.2.15 MA1265.2.16 MA1265.2.17 MA1265.2.18 MA1265.2.19 MA1265.2.2 MA1265.2.20 MA1265.2.3 MA1265.2.4 MA1265.2.5 MA1265.2.6 MA1265.2.7 MA1265.2.8 MA1265.2.9 |
| Publications: | Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.