DNA Binding Motif

						

			
Accessions: M0276 (AthalianaCistrome v4_May2016)

			
Names: COG1.ampDAP, T05063;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: httwTkyACTTTTTb
Weblogo: 
PSSM: P0      A      C      G      T
01    154    152     85    204      h
02    138    109     45    303      t
03    115     82     46    352      t
04    150     37     45    363      w
05     79     21     51    444      T
06    118     13    163    301      k
07     57    347      1    190      y
08    442     82     46     25      A
09      0    595      0      0      C
10      0      0      0    595      T
11      0      0      0    595      T
12      0      0      0    595      T
13    141      0      0    454      T
14     43     35     21    496      T
15    113    156    155    171      b
Binding TFs: T05063 (Dof domain, zinc finger)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.