DNA Binding Motif

						

			
Accessions: ftz (DrosophilaTF 1.1)

			
Names: ftz
Organisms: Drosophila melanogaster
Libraries: DrosophilaTF 1.1 1
1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed]
Length: 13
Consensus: rcryTAATGrcmt
Weblogo: 
PSSM: P0      A      C      G      T
01 0.2857 0.1905  0.381 0.1429      r
02 0.2381 0.3333 0.2381 0.1905      c
03 0.2857 0.1429 0.5238 0.0476      r
04 0.0952 0.3333 0.1429 0.4286      y
05      0      0      0      1      T
06      1      0      0      0      A
07      1      0      0      0      A
08      0 0.0476      0 0.9524      T
09      0 0.0952 0.7619 0.1429      G
10 0.4762 0.0476 0.3333 0.1429      r
11 0.1429 0.4286 0.2381 0.1905      c
12 0.3333 0.4286 0.0952 0.1429      m
13 0.1905 0.1905 0.2381  0.381      t
Binding TFs: ftz (Homeobox domain, Fushi tarazu (FTZ), N-terminal region)
			
Publications: Wilson D.S, Sheng G, Jun S, Desplan C. Conservation and diversification in homeodomain-DNA interactions: a comparative genetic analysis. Proceedings of the National Academy of Sciences of the United States of America 93:6886-91 (1996). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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