DNA Binding Motif
| Accessions: | MA2421.1 (JASPAR 2024) |
| Names: | SBP8 |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 8 |
| Consensus: | arGTACAa |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 28920 3935 6297 9248 a 02 30785 226 17080 309 r 03 200 70 48049 81 G 04 256 231 509 47404 T 05 48160 67 52 121 A 06 275 47947 79 99 C 07 46945 397 519 539 A 08 27864 5026 5397 10113 a |
| Binding TFs: | A0A060CV13 |
| Binding Sites: | MA2421.1.6 MA2421.1.17 / MA2421.1.18 MA2421.1.8 MA2421.1.1 / MA2421.1.20 MA2421.1.13 MA2421.1.12 / MA2421.1.15 MA2421.1.10 MA2421.1.11 / MA2421.1.19 MA2421.1.14 MA2421.1.16 MA2421.1.2 MA2421.1.3 MA2421.1.4 MA2421.1.5 / MA2421.1.7 MA2421.1.9 |
| Publications: | Birkenbihl RP, Jach G, Saedler H, Huijser P. 2005. Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains. J Mol Biol 352: 585-96. [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.