DNA Binding Motif

						

			
Accessions: Foxc1_DBD_1 (HumanTF 1.0)

			
Names: Foxc1
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 11
Consensus: rTAAAyAAACA
Weblogo: 
PSSM: P0      A      C      G      T
01    738     61   1592     51      r
02    184    165     30   1496      T
03   1232    141      7     19      A
04   1268     30      6     13      A
05   1312      1     25      0      A
06      3    628      1    881      y
07   1301      2      1      3      A
08   1303      0      0      2      A
09   1319     25     26     19      A
10     42   1337     15    220      C
11   1328     30     40      7      A
Binding TFs: Foxc1_DBD (Fork head domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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