DNA Binding Motif

						

			
Accessions: FOXA2_2 (HT-SELEX2 May2017)

			
Names: FOXA2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 20
Consensus: ywrwGTmAATATTkryaywr
Weblogo: 
PSSM: P0      A      C      G      T
01    724    920    797    821      y
02   1351    796    464   1559      w
03    982    762    908    609      r
04   1128    567    780   1733      w
05    366    132   3042    266      G
06    116    853     52   3006      T
07   1172   2059     37    160      m
08   3127    331      0     44      A
09   3232     12     19     93      A
10      4    334      0   3179      T
11   3159     19    329      1      A
12     89     53     77   3213      T
13    113     27    292   3142      T
14    420     33   1402   1762      k
15   1758     69   1438     93      r
16    383   2178    211    936      y
17    906    775    772    807      a
18    485   1372    512   1611      y
19   1661    422    736   1275      w
20    840    770    856    796      r
Binding TFs: FOXA2 (Fork head domain, Forkhead N-terminal region)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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