DNA Binding Motif

						

			
Accessions: CG31670_SOLEXA_5_FBgn0031375 (FlyZincFinger 1.0 )

			
Names: CG31670
Organisms: Drosophila melanogaster
Libraries: FlyZincFinger 1.0  1
1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]
Length: 15
Consensus: ymAAAwGAGCAAycv
Weblogo: 
PSSM: P0      A      C      G      T
01     57    109     35     70      y
02    136     97     46     34      m
03    307      3     16      7      A
04    316      1      5     11      A
05    272      1     56      4      A
06    200      3      3    127      w
07      2      3    325      3      G
08    254     44     24     11      A
09     41     15    253     24      G
10      9    311      4      9      C
11    332      0      1      0      A
12    262      0     35     36      A
13     23    207      2    101      y
14     70    148     71     41      c
15    114     81     83     15      v
Binding TFs: CG31670 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
			
Publications: Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.