DNA Binding Motif

						

			
Accessions: M0202 (AthalianaCistrome v4_May2016)

			
Names: T27069;, TGA10.ampDAP
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 14
Consensus: drTGACGTCAkCaw
Weblogo: 
PSSM: P0      A      C      G      T
01    196     67    176    161      d
02    295     61    235      9      r
03      2      1      0    597      T
04      0      3    589      8      G
05    600      0      0      0      A
06      0    589      0     11      C
07     20      1    579      0      G
08      0      0      0    600      T
09     57    543      0      0      C
10    596      0      2      2      A
11      0     82    202    316      k
12     31    429     60     80      C
13    308     57    105    130      a
14    168     79     94    259      w
Binding TFs: T27069 (bZIP transcription factor, Basic region leucine zipper, Seed dormancy control)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.