DNA Binding Motif

						

			
Accessions: XBP1_4 (HT-SELEX2 May2017)

			
Names: XBP1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: srTgACGTcAys
Weblogo: 
PSSM: P0      A      C      G      T
01    130    343    472    183      s
02    583    318    545     93      r
03     36    151      0   1128      T
04     69    175   1128    306      g
05   1128      7     30    109      A
06      0   1128     21     48      C
07     21      0   1128      0      G
08     86     69     17   1128      T
09    312   1128    134    116      c
10   1128     21     75     12      A
11     54    584    247    544      y
12    201    392    364    171      s
Binding TFs: XBP1 (bZIP transcription factor, Basic region leucine zipper)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.