DNA Binding Motif

						

			
Accessions: UN0204.1 (JASPAR 2024)

			
Names: ZNF565
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 24
Consensus: rCCATGyTGTGAGGAAGCyCAAGC
Weblogo: 
PSSM: P0      A      C      G      T
01    187      3    321     24      r
02      9    518      3      5      C
03      0    534      0      1      C
04    528      2      0      5      A
05      0      8      2    525      T
06     77     15    433     10      G
07     19    251     11    254      y
08      4     25      0    506      T
09     54      9    464      8      G
10     14      9     53    459      T
11     86     14    422     13      G
12    500      1     30      4      A
13      1      0    534      0      G
14      6      1    527      1      G
15    500      8     23      4      A
16    422     62      8     43      A
17     83      9    443      0      G
18      3    522      0     10      C
19     18    349      4    164      y
20      9    517      3      6      C
21    509      5      8     13      A
22    429     13     88      5      A
23     51     46    404     34      G
24     31    391     34     79      C
Type: Heterodimer
Binding TFs: Q8N9K5 (Zinc finger, C2H2 type, KRAB box, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q8N9K5
Binding Sites: UN0204.1.1
UN0204.1.10
UN0204.1.11
UN0204.1.12
UN0204.1.13
UN0204.1.14
UN0204.1.15
UN0204.1.16
UN0204.1.17
UN0204.1.18
UN0204.1.19
UN0204.1.2
UN0204.1.20
UN0204.1.3
UN0204.1.4
UN0204.1.5
UN0204.1.6
UN0204.1.7
UN0204.1.8
UN0204.1.9
			
	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.