DNA Binding Motif

						

			
Accessions: Hoxa10_2 (HumanTF2 1.0)

			
Names: Hoxa10
Organisms: Pantheropsis Guttatus
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: HT-SELEX; HT-SELEX generated reference PWM
Length: 11
Consensus: gGyMATWAAAh
Weblogo: 
PSSM: P0      A      C      G      T
01    481    220   1140    302      g
02    170     72   2142     63      G
03      0    778      0   1364      y
04   2142    837      0     24      M
05   2142     22      0     10      A
06     45      0     19   2142      T
07   1490      0      0    652      W
08   2142      0      0      0      A
09   2142      0      2     35      A
10   2142    278     67    474      A
11    565    657    131    789      h
Binding TFs: Hoxa10_TF1 (Homeobox domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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