DNA Binding Motif

						

			
Accessions: SREBF2_methyl_2 (HT-SELEX2 May2017)

			
Names: SREBF2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: ATCACmCCAy
Weblogo: 
PSSM: P0      A      C      G      T
01   8457   1217   2625    127      A
02    396    557     51   8457      T
03     78   8457    558     50      C
04   8457     46    430    252      A
05     62   8457    971    924      C
06   5108   3349   1721    372      m
07    121   8457      0    863      C
08     50   8457    202    282      C
09   8457      9    520     33      A
10      1   4115    228   4342      y
Binding TFs: SREBF2 (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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