DNA Binding Motif

						

			
Accessions: 1b01_B (3D-footprint 20231221)

			
Names: TRANSCRIPTIONAL REPRESSOR COPG
Organisms: Streptococcus agalactiae
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: TRANSCRIPTIONAL REPRESSOR COPG/DNA COMPLEX
Length: 7
Consensus: GTGCACG
Weblogo: 
PSSM: P0      A      C      G      T
01      6      6     76      8      G
02      0      1      6     89      T
03      6      6     76      8      G
04      6     78      6      6      C
05     76      6      8      6      A
06      0     90      6      0      C
07      0      0     96      0      G
Binding TFs: 1b01_B (Ribbon-helix-helix protein, copG family)
Binding Sites: 1b01_E
1b01_F
			
Publications: Gomis-Rüth F.X, Solá M, Acebo P, Párraga A, Guasch A, Eritja R, González A, Espinosa M, del Solar G, Coll M. The structure of plasmid-encoded transcriptional repressor CopG unliganded and bound to its operator. The EMBO journal 17:7404-15 (1998). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.