DNA Binding Motif

Accessions: HOXC10_methyl_5 (HT-SELEX2 May2017)
Names: HOXC10
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: sGTCGTAAAay
Weblogo:
PSSM: P0 A C G T
01 6288 10471 15608 4369 s
02 8925 854 27812 0 G
03 0 0 0 36736 T
04 0 36736 0 0 C
05 1482 0 36736 2 G
06 0 0 0 36736 T
07 36736 0 3 3047 A
08 36736 0 0 0 A
09 36736 5 0 14 A
10 36736 8669 4574 10741 a
11 6951 14257 5375 10152 y
Binding TFs: HOXC10 (Homeobox domain)
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

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