DNA Binding Motif

						

			
Accessions: HOXC10_methyl_5 (HT-SELEX2 May2017)

			
Names: HOXC10
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: sGTCGTAAAay
Weblogo: 
PSSM: P0      A      C      G      T
01   6288  10471  15608   4369      s
02   8925    854  27812      0      G
03      0      0      0  36736      T
04      0  36736      0      0      C
05   1482      0  36736      2      G
06      0      0      0  36736      T
07  36736      0      3   3047      A
08  36736      0      0      0      A
09  36736      5      0     14      A
10  36736   8669   4574  10741      a
11   6951  14257   5375  10152      y
Binding TFs: HOXC10 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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