DNA Binding Motif

						

			
Accessions: SREBF1_methyl_2 (HT-SELEX2 May2017)

			
Names: SREBF1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: aTCACmCCAy
Weblogo: 
PSSM: P0      A      C      G      T
01   2211    752    545     51      a
02    151    520      0   2756      T
03     14   2756    148      0      C
04   2756     68    176    106      A
05      0   2756    153    263      C
06   1318   1438    721      0      m
07    126   2756     68    392      C
08      7   2756    154     44      C
09   2756     77    158     38      A
10      6   1637     60   1119      y
Binding TFs: SREBF1 (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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