DNA Binding Motif

						

			
Accessions: TAL1_HUMAN.H10MO.A|M01547 (HOCOMOCO 10)

			
Names: TAL1
Organisms: Homo sapiens
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: Tal-related factors{1.2.3}; Tal / HEN-like factors{1.2.3.1}
Length: 19
Consensus: ctkkkgsgsrswGATAAgr
Weblogo: 
PSSM: P0      A      C      G      T
01     40    274    113     73      c
02     40     93     67    300      t
03     12     20    336    132      k
04     34    101    239    126      k
05     84    124    143    149      k
06    124    123    150    103      g
07     99    127    178     96      s
08    100    124    161    115      g
09     98    146    142    114      s
10    155     82    165     98      r
11     52    221    147     80      s
12    311     17      4    168      w
13      2      0    498      0      G
14    499      1      0      0      A
15      0      1      0    499      T
16    470      3      4     23      A
17    402     10     68     20      A
18     82     98    263     57      g
19    135    112    195     58      r
Binding TFs: TAL1_HUMAN (Helix-loop-helix DNA-binding domain)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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