DNA Binding Motif
| Accessions: | MA2453.1 (JASPAR 2024) |
| Names: | SPL8B |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 9 |
| Consensus: | ATAGTACTC |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 14567 1632 1485 587 A 02 1462 493 312 16004 T 03 16702 261 646 662 A 04 139 580 17430 122 G 05 97 217 77 17880 T 06 17951 82 119 119 A 07 423 17548 167 133 C 08 968 319 605 16379 T 09 3465 12595 704 1507 C |
| Binding Sites: | MA2453.1.13 / MA2453.1.18 / MA2453.1.2 MA2453.1.17 / MA2453.1.9 MA2453.1.16 MA2453.1.15 MA2453.1.1 MA2453.1.11 / MA2453.1.19 MA2453.1.4 MA2453.1.10 MA2453.1.12 MA2453.1.14 MA2453.1.20 / MA2453.1.3 MA2453.1.5 MA2453.1.6 MA2453.1.7 MA2453.1.8 |
| Publications: | Yamasaki K, Kigawa T, Inoue M, Yamasaki T, Yabuki T, Aoki M, Seki E, Matsuda T, Tomo Y, Terada T, Shirouzu M, Tanaka A, Seki M, Shinozaki K, Yokoyama S. An Arabidopsis SBP-domain fragment with a disrupted C-terminal zinc-binding site retains its tertiary structure. FEBS Lett 580:2109-16 (2006). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.