DNA Binding Motif

						

			
Accessions: M0734 (AthalianaCistrome v4_May2016)

			
Names: SPL15.ampDAP, T13640;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: wwttdTCCGTACAaw
Weblogo: 
PSSM: P0      A      C      G      T
01    228     81     74    205      w
02    176    102     94    216      w
03    141    122    102    223      t
04    109    127    109    243      t
05    148      9    248    183      d
06     51      0      7    530      T
07      7    580      0      1      C
08      8    580      0      0      C
09      0      0    588      0      G
10      0      0      0    588      T
11    588      0      0      0      A
12      0    588      0      0      C
13    459     20     87     22      A
14    296     77    122     93      a
15    148     98     53    289      w
Binding TFs: T13640 (SBP domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.