DNA Binding Motif

						

			
Accessions: PKNOX2_2 (HT-SELEX2 May2017)

			
Names: PKNOX2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: TGACAssTGTCA
Weblogo: 
PSSM: P0      A      C      G      T
01   1342   1619    655  13905      T
02    235    441  13905    168      G
03  13905    307   1578   1793      A
04     82  13905     65    175      C
05  13905     21   1004     81      A
06    259   3860   6884   2901      s
07   2994   6670   4015    226      s
08     65    989     10  13905      T
09    202     41  13905     97      G
10   1869   1634    204  13905      T
11    174  13905    417    252      C
12  13905    724   1568   1509      A
Binding TFs: PKNOX2 (Homeobox domain, Homeobox KN domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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