DNA Binding Motif

						

			
Accessions: HOXA13_DBD_1 (HumanTF 1.0)

			
Names: HOXA13
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 3
Length: 10
Consensus: cCmATAAAam
Weblogo: 
PSSM: P0      A      C      G      T
01    108    516    175     90      c
02     46    516     11    154      C
03    516    259     13    146      m
04    516      0      2     25      A
05      0     19      0    516      T
06    516     18      4     90      A
07    516      5      9     30      A
08    516     28      0     16      A
09    516    175     67    119      a
10    163    190     43    121      m
Binding TFs: HOXA13_DBD (Homeobox domain, Hox protein A13 N terminal)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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