DNA Binding Motif

						

			
Accessions: PAX4_methyl_1 (HT-SELEX2 May2017)

			
Names: PAX4
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 18
Consensus: tTyACGCwTsAmyGmaya
Weblogo: 
PSSM: P0      A      C      G      T
01   1424    961    703   3882      t
02   1189    166   1636   6970      T
03   1214   3223     30   3747      y
04   6970   1990    628    147      A
05     11   6970      7    659      C
06    125      5   6970      3      G
07      0   6970   1034     11      C
08   3608    631    305   3362      w
09    166   1469      8   6970      T
10    125   2526   4444    102      s
11   6970     69   1561     21      A
12   2545   1771   1515   1139      m
13    232   3442     89   3528      y
14   1312    137   6970   1670      G
15   2506   3386    924    155      m
16   4018    902   1108    942      a
17    339   4866    231   2104      y
18   3323    875   1031   1741      a
Binding TFs: PAX4 (Homeobox domain, 'Paired box' domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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