DNA Binding Motif

						

			
Accessions: TBX21_DBD_3 (HumanTF 1.0)

			
Names: TBX21
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 19
Consensus: TmACACcTydrAGGTGTGA
Weblogo: 
PSSM: P0      A      C      G      T
01    362   1470    237  13899      T
02   2735   5472   1554    354      m
03   9452    149   2124    700      A
04     67   9112     52     16      C
05   9853     38   1111     27      A
06    184   9077    201     94      C
07   1312   8039   1698   1926      c
08   1384   2243    614  13172      T
09   2851   3053   1789   3915      y
10   3262   2535   2994   2961      d
11   4483   1080   4004   2546      r
12   9483    349   1716    875      A
13   2379   1932  12765   1691      G
14    109    443  14960    253      G
15     54   1373    183  13971      T
16     27     11  15077     16      G
17   1357   2732    225  12798      T
18    438   1038  10048   2490      G
19   9769     78   1022    199      A
Binding TFs: TBX21_DBD (T-box)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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